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Status
Public on Aug 06, 2004
Title
nl129
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:120, Count:32 Corner- Avg:5300, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:30.487331,SFGene:All Background:Avg:46.74,Stdev:2.61,Max:57.4,Min:39.8 Noise:Avg:1.68,Stdev:0.17,Max:2.3,Min:1.4 RawQ:1.97 Keywords = ALL
Submission date
Sep 06, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (5)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE645
ASP resistant all ALL
GSE647
PRED resistant all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
564.1
0.031336
1053_at
312.6
0.014937
117_at
268.6
0.150527
121_at
1778.7
0.004863
1255_g_at
132.7
0.204022
1294_at
796.0
0.005643
1316_at
140.2
0.234557
1320_at
49.5
0.581931
1405_i_at
159.2
0.296809
1431_at
169.0
0.054470
1438_at
139.3
0.621816
1487_at
602.3
0.117160
1494_f_at
447.6
0.039365
1598_g_at
923.4
0.048995
160020_at
576.1
0.267463
1729_at
435.0
0.039365
1773_at
246.4
0.218983
177_at
40.5
0.795978
179_at
1143.5
0.250724
1861_at
449.7
0.014937
Total number of rows: 22283 Table truncated, full table size 560 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9813.CEL.gz
3.1 Mb
(ftp) (http)
CEL