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Status
Public on Aug 06, 2004
Title
nl068
Sample type
RNA
Source name
primary acute lymphoblastic leukemia cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Sample Type: Human Total RNA Project: Evans Sample User: jmorris Experiment User: jmorris Algorithm: Statistical Corner+ Avg:57, Count:32 Corner- Avg:3538, Count:32 BF: Alpha1:0.05,Alpha2:0.065,Tau:0.015,Gamma1H:0.0045,Gamma1L:0.0045,Gamma2H:0.006,Gamma2L:0.006,Perturbation:1.1,TGT:500,NF:1.000000,SF:70.494461,SFGene:All Background:Avg:38.74,Stdev:0.60,Max:40.6,Min:37.5 Noise:Avg:1.30,Stdev:0.05,Max:1.5,Min:1.2 RawQ:1.80 Keywords = ALL
Submission date
Sep 05, 2003
Last update date
May 28, 2005
Contact name
William E Evans
E-mail(s)
william.evans@stjude.org
Phone
901-495-4995
Fax
901-495-6869
URL
http://www.stjude.org/leukemia/bio_evans.htm
Organization name
St.Jude Children's Research Hospital
Department
Pharmaceutical Sciences
Lab
Evans
Street address
332 N. Lauderdale St.
City
Memphis
State/province
TN
ZIP/Postal code
38105
Country
USA
Platform ID
GPL96
Series (4)
GSE635
Identification of novel genomic determinants of cellular drug resistance in acute lymphoblastic leukemia.
GSE643
ASP sensitive all ALL
GSE646
PRED sensitive all ALL
Data table header descriptions
ID_REF
As defined by Affymetrix, these are the probe set identifiers, each of which is unique to a specific probe set defining a specific region of a single gene or set.
VALUE
This is the final calculated meauremeent for each probe set identifer that has been made comparable, through scaling or normalization, accross all samples and rows.
Detection_p_value
Defines the confidence in the calculated signal accurately reflecting the expression level of the specific gene or est that the probe set identifies.
Data table
ID_REF
VALUE
Detection_p_value
1007_s_at
882.7
0.013092
1053_at
299.3
0.358690
117_at
325.3
0.234557
121_at
1500.5
0.004863
1255_g_at
327.4
0.204022
1294_at
836.8
0.098054
1316_at
243.4
0.267463
1320_at
78.6
0.679170
1405_i_at
42.3
0.921094
1431_at
320.1
0.021866
1438_at
315.4
0.397994
1487_at
665.1
0.162935
1494_f_at
397.3
0.189687
1598_g_at
1001.3
0.189687
160020_at
547.9
0.089405
1729_at
451.1
0.250724
1773_at
325.5
0.378184
177_at
220.4
0.500000
179_at
766.9
0.234557
1861_at
623.0
0.081337
Total number of rows: 22283 Table truncated, full table size 561 Kbytes .Supplementary file
Size
Download
File type/resource
GSM9752.CEL.gz
2.9 Mb
(ftp) (http)
CEL