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Sample GSM946544 Query DataSets for GSM946544
Status Public on Jun 11, 2012
Title PSU_ChipSeq_Erythrobl_Input
Sample type SRA
Source name Erythrobl
Organism Mus musculus
Characteristics lab: PSU-m
lab description: Hardison - Penn State University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: Erythrobl
cell organism: mouse
cell description: Erythroblast, ter119+ cells from liver
cell sex: B
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
age: E14.5
age description: Embryonic day 14.5
control: Input
control description: Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid: wgEncodeEM002350
replicate: 1
strain: CD-1
strain description: Multipurpose mouse used for safety testing, aging studies, surgical models and pseudopregnancy.
Biomaterial provider Mitch Weiss lab
Growth protocol Erythroblast__Hardison_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Jun 11, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9250
Series (4)
GSE36028 Histone Modifications by ChIP-seq from ENCODE/PSU
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
GSE51337 Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis
Reanalyzed by GSE59801
SRA SRX153184
BioSample SAMN01047987
Named Annotation GSM946544_mm9_wgEncodePsuHistoneErythroblInputBE14halfCd1InputRepSignalRep1.bigWig
Named Annotation GSM946544_mm9_wgEncodePsuHistoneErythroblInputBE14halfCd1InputRepSignalRep2.bigWig
Named Annotation GSM946544_mm9_wgEncodePsuHistoneErythroblInputBE14halfCd1InputSig.bigWig

Supplementary file Size Download File type/resource
GSM946544_mm9_wgEncodePsuHistoneErythroblInputBE14halfCd1InputRepSignalRep1.bigWig 2.7 Gb (ftp)(http) BIGWIG
GSM946544_mm9_wgEncodePsuHistoneErythroblInputBE14halfCd1InputRepSignalRep2.bigWig 2.5 Gb (ftp)(http) BIGWIG
GSM946544_mm9_wgEncodePsuHistoneErythroblInputBE14halfCd1InputSig.bigWig 4.1 Gb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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