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Sample GSM94335 Query DataSets for GSM94335
Status Public on Jul 01, 2006
Title PBMCs from an HIV positive transmitter mother in Botswana (3)
Sample type RNA
 
Source name Human peripheral blood mononuclear cells (PBMCs) from an HIV positive Batswana woman
Organism Homo sapiens
Characteristics Botswana mother between 17 and 44 years old. HIV positive. Transmitted virus to child.
Extracted molecule total RNA
Label Biotin
 
Description HIV seropositive and drug naive
HIV seropositive transmitter mothers
Data processing Data scaled with GCOS
 
Submission date Jan 30, 2006
Last update date Sep 13, 2006
Contact name Monty Montano
E-mail(s) mmontano@bu.edu
Phone 617 414-4806
Fax 617 414-3561
URL http://www.bmc.org/HIV-AIDS/MontyMontano.htm
Organization name Boston Medical Center
Department Medicine
Lab Center for HIV-1/AIDS Care and Research
Street address 650 Albany Street, Bldg X, room 640
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL571
Series (1)
GSE4124 Gene-expression profiling of HIV-1 infection and perinatal transmission in Botswana

Data table header descriptions
ID_REF
VALUE GCOS scaled intensity values
DETECTION_P-VALUE Quality of measurement
ABS_CALL Present, absent or marginal call
SCALED_VALUE Scaled intensity values

Data table
ID_REF VALUE DETECTION_P-VALUE ABS_CALL SCALED_VALUE
1007_s_at 4.3 0.581944 A 111.1593
1053_at 1 0.602006 A 25.851
117_at 29.7 0.000959 P 767.7747
121_at 18.1 0.019304 P 467.9031
1255_g_at 3.6 0.267428 A 93.0636
1294_at 80.8 0.003067 P 2088.7608
1316_at 0.6 0.621835 A 15.5106
1320_at 5.7 0.697453 A 147.3507
1405_i_at 1931.4 0.000491 P 49928.6214
1431_at 1.2 0.378165 A 31.0212
1438_at 4.8 0.32083 A 124.0848
1487_at 16.3 0.250724 A 421.3713
1494_f_at 10 0.098017 A 258.51
1598_g_at 14.9 0.175989 A 385.1799
160020_at 11 0.089405 A 284.361
1729_at 20 0.017001 P 517.02
177_at 1.3 0.541191 A 33.6063
1773_at 1.1 0.660442 A 28.4361
179_at 11 0.541184 A 284.361
1861_at 7.4 0.150527 A 191.2974

Total number of rows: 22277

Table truncated, full table size 751 Kbytes.




Supplementary data files not provided

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