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Sample GSM94333 Query DataSets for GSM94333
Status Public on Jul 01, 2006
Title PBMCs from an HIV positive transmitter mother in Botwana (1)
Sample type RNA
 
Source name Human peripheral blood mononuclear cells (PBMCs) from an HIV positive Batswana woman
Organism Homo sapiens
Characteristics Botswana mother between 17 and 44 years old. HIV positive. Transmitted virus to child.
Extracted molecule total RNA
Label biotin
 
Description HIV seropositive and drug naive
HIV seropositive transmitter mothers
Data processing Data scaled with GCOS
 
Submission date Jan 30, 2006
Last update date Sep 13, 2006
Contact name Monty Montano
E-mail(s) mmontano@bu.edu
Phone 617 414-4806
Fax 617 414-3561
URL http://www.bmc.org/HIV-AIDS/MontyMontano.htm
Organization name Boston Medical Center
Department Medicine
Lab Center for HIV-1/AIDS Care and Research
Street address 650 Albany Street, Bldg X, room 640
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL571
Series (1)
GSE4124 Gene-expression profiling of HIV-1 infection and perinatal transmission in Botswana

Data table header descriptions
ID_REF
VALUE GCOS scaled intensity values
DETECTION_P-VALUE Quality of measurement
ABS_CALL Present, absent or marginal call
SCALED_VALUE Scaled intensity values

Data table
ID_REF VALUE DETECTION_P-VALUE ABS_CALL SCALED_VALUE
1007_s_at 10.8 0.47938 A 40.94097833
1053_at 4.7 0.438361 A 17.81690724
117_at 44 0.000562 P 166.7965784
121_at 23.7 0.060419 M 89.84270245
1255_g_at 1.9 0.52062 A 7.202579521
1294_at 59.2 0.017001 P 224.4172146
1316_at 8.2 0.013092 P 31.08481688
1320_at 4.3 0.660468 A 16.30057471
1405_i_at 484.2 0.000762 P 1835.520529
1431_at 2.2 0.35869 A 8.339828919
1438_at 5.9 0.162935 A 22.36590483
1487_at 24.7 0.089405 A 93.63353378
1494_f_at 6.8 0.302547 A 25.77765302
1598_g_at 12.6 0.339558 A 47.76447472
160020_at 15.5 0.081337 A 58.75788557
1729_at 20.8 0.218983 A 78.8492916
177_at 4.7 0.218983 A 17.81690724
1773_at 0.6 0.795978 A 2.274498796
179_at 30.6 0.302547 A 115.9994386
1861_at 8 0.234557 A 30.32665062

Total number of rows: 22277

Table truncated, full table size 823 Kbytes.




Supplementary data files not provided

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