GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM938060 Query DataSets for GSM938060
Status Public on Jun 17, 2014
Title G3361-Scrambled Rep2
Sample type RNA
Source name Melanoma cell-line, G3361, control
Organism Homo sapiens
Characteristics cell line: G3361
cell type: pigmented melanoma
Extracted molecule total RNA
Extraction protocol Qiagen miniprep kit with additional 15min on-column DNaseI digestion
Label biotin
Label protocol Refer to Dana Farber Cancer Institute Microarray Core
Hybridization protocol Refer to Dana Farber Cancer Institute Microarray Core
Scan protocol Refer to Dana Farber Cancer Institute Microarray Core
Data processing Refer to Dana Farber Cancer Institute Microarray Core
Submission date May 29, 2012
Last update date Jun 19, 2014
Contact name Markus Hermann Frank
Phone 617-919-2993
Organization name Boston Children's Hospital
Department Medicine
Lab Frank Laboratory
Street address 300 Longwood Avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platform ID GPL571
Series (1)
GSE38290 Functional analysis of ABCB5 in melanoma cells

Data table header descriptions

Data table
AFFX-BioB-5_at 415.9 P 0.000509
AFFX-BioB-M_at 714.8 P 0.000081
AFFX-BioB-3_at 347.4 P 0.000147
AFFX-BioC-5_at 1203.4 P 0.000110
AFFX-BioC-3_at 1425.2 P 0.000044
AFFX-BioDn-5_at 1979.1 P 0.000052
AFFX-BioDn-3_at 5746.8 P 0.000258
AFFX-CreX-5_at 17147.3 P 0.000052
AFFX-CreX-3_at 17536.5 P 0.000044
AFFX-DapX-5_at 3.2 A 0.470241
AFFX-DapX-M_at 13.2 A 0.300606
AFFX-DapX-3_at 1.9 A 0.971554
AFFX-LysX-5_at 10.7 A 0.574038
AFFX-LysX-M_at 3.1 A 0.852061
AFFX-LysX-3_at 11.9 A 0.108959
AFFX-PheX-5_at 1.6 A 0.904333
AFFX-PheX-M_at 4.8 A 0.712257
AFFX-PheX-3_at 6.9 A 0.834139
AFFX-ThrX-5_at 4.1 A 0.834139
AFFX-ThrX-M_at 3.6 A 0.852061

Total number of rows: 22277

Table truncated, full table size 597 Kbytes.

Supplementary file Size Download File type/resource
GSM938060_G3361_SCR2.CEL.gz 2.3 Mb (ftp)(http) CEL
GSM938060_MF2010021824.EXP.gz 374 b (ftp)(http) EXP
GSM938060_MF2010021824.TXT.gz 236.3 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap