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Sample GSM938055 Query DataSets for GSM938055
Status Public on Jun 17, 2014
Title A375-Vector Rep3
Sample type RNA
Source name Melanoma cell-line, A375, control
Organism Homo sapiens
Characteristics cell line: A375
cell type: non-pigmented melanoma
Extracted molecule total RNA
Extraction protocol Qiagen miniprep kit with additional 15min on-column DNaseI digestion
Label biotin
Label protocol Refer to Dana Farber Cancer Institute Microarray Core
Hybridization protocol Refer to Dana Farber Cancer Institute Microarray Core
Scan protocol Refer to Dana Farber Cancer Institute Microarray Core
Data processing Refer to Dana Farber Cancer Institute Microarray Core
Submission date May 29, 2012
Last update date Jun 19, 2014
Contact name Markus Hermann Frank
Phone 617-919-2993
Organization name Boston Children's Hospital
Department Medicine
Lab Frank Laboratory
Street address 300 Longwood Avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platform ID GPL571
Series (1)
GSE38290 Functional analysis of ABCB5 in melanoma cells

Data table header descriptions

Data table
AFFX-BioB-5_at 367.4 P 0.000581
AFFX-BioB-M_at 696.0 P 0.000052
AFFX-BioB-3_at 390.5 P 0.000052
AFFX-BioC-5_at 1255.7 P 0.000060
AFFX-BioC-3_at 1591.7 P 0.000044
AFFX-BioDn-5_at 2281.3 P 0.000044
AFFX-BioDn-3_at 6162.2 P 0.000095
AFFX-CreX-5_at 16100.8 P 0.000052
AFFX-CreX-3_at 16542.9 P 0.000044
AFFX-DapX-5_at 1.9 A 0.724854
AFFX-DapX-M_at 6.0 A 0.645547
AFFX-DapX-3_at 2.6 A 0.860518
AFFX-LysX-5_at 1.0 A 0.834139
AFFX-LysX-M_at 2.1 A 0.824693
AFFX-LysX-3_at 1.3 A 0.574038
AFFX-PheX-5_at 1.1 A 0.963431
AFFX-PheX-M_at 1.2 A 0.957038
AFFX-PheX-3_at 12.6 A 0.603080
AFFX-ThrX-5_at 2.2 A 0.953518
AFFX-ThrX-M_at 3.3 A 0.772383

Total number of rows: 22277

Table truncated, full table size 595 Kbytes.

Supplementary file Size Download File type/resource
GSM938055_A375_V3.CEL.gz 2.2 Mb (ftp)(http) CEL
GSM938055_MF2010021819.EXP.gz 372 b (ftp)(http) EXP
GSM938055_MF2010021819.TXT.gz 234.3 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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