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Sample GSM938054 Query DataSets for GSM938054
Status Public on Jun 17, 2014
Title A375-Vector Rep2
Sample type RNA
Source name Melanoma cell-line, A375, control
Organism Homo sapiens
Characteristics cell line: A375
cell type: non-pigmented melanoma
Extracted molecule total RNA
Extraction protocol Qiagen miniprep kit with additional 15min on-column DNaseI digestion
Label biotin
Label protocol Refer to Dana Farber Cancer Institute Microarray Core
Hybridization protocol Refer to Dana Farber Cancer Institute Microarray Core
Scan protocol Refer to Dana Farber Cancer Institute Microarray Core
Data processing Refer to Dana Farber Cancer Institute Microarray Core
Submission date May 29, 2012
Last update date Jun 19, 2014
Contact name Markus Hermann Frank
Phone 617-919-2993
Organization name Boston Children's Hospital
Department Medicine
Lab Frank Laboratory
Street address 300 Longwood Avenue
City Boston
State/province Massachusetts
ZIP/Postal code 02115
Country USA
Platform ID GPL571
Series (1)
GSE38290 Functional analysis of ABCB5 in melanoma cells

Data table header descriptions

Data table
AFFX-BioB-5_at 322.4 P 0.000581
AFFX-BioB-M_at 430.9 P 0.000081
AFFX-BioB-3_at 220.1 P 0.000110
AFFX-BioC-5_at 814.9 P 0.000060
AFFX-BioC-3_at 918.0 P 0.000044
AFFX-BioDn-5_at 1383.9 P 0.000052
AFFX-BioDn-3_at 4093.2 P 0.000340
AFFX-CreX-5_at 10717.3 P 0.000052
AFFX-CreX-3_at 11243.0 P 0.000044
AFFX-DapX-5_at 3.6 A 0.485110
AFFX-DapX-M_at 3.4 A 0.659339
AFFX-DapX-3_at 2.9 A 0.868639
AFFX-LysX-5_at 6.7 A 0.340661
AFFX-LysX-M_at 3.2 A 0.834139
AFFX-LysX-3_at 4.9 A 0.313723
AFFX-PheX-5_at 1.1 A 0.984817
AFFX-PheX-M_at 1.9 A 0.910522
AFFX-PheX-3_at 23.5 A 0.514890
AFFX-ThrX-5_at 11.3 A 0.617401
AFFX-ThrX-M_at 2.3 A 0.883887

Total number of rows: 22277

Table truncated, full table size 595 Kbytes.

Supplementary file Size Download File type/resource
GSM938054_A375_V2.CEL.gz 2.2 Mb (ftp)(http) CEL
GSM938054_MF2010021818.EXP.gz 371 b (ftp)(http) EXP
GSM938054_MF2010021818.TXT.gz 235.3 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

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