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Sample GSM936085 Query DataSets for GSM936085
Status Public on May 24, 2012
Title Broad_Combined_HSMM
Sample type SRA
Source name HSMM
Organism Homo sapiens
Characteristics lab: Broad
lab description: Bernstein - Broad Institute
datatype: Combined
datatype description: Multi-assay Synthesis
cell: HSMM
cell organism: human
cell description: skeletal muscle myoblasts
cell karyotype: normal
cell lineage: mesoderm
cell sex: U
softwareversion: ChromHMM_ENCODEDynamicsPaper
Biomaterial provider Refer to the protocol documents for differing sources
Growth protocol HSMM_Bernstein_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Data processing
Submission date May 23, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9052
Series (1)
GSE38163 Chromatin State Segmentation by HMM from ENCODE/Broad
Reanalysis of GSM733637
Reanalysis of GSM733663
Reanalysis of GSM733667
Reanalysis of GSM733676
Reanalysis of GSM733702
Reanalysis of GSM733730
Reanalysis of GSM733741
Reanalysis of GSM733755
Reanalysis of GSM733760
Reanalysis of GSM733761
Reanalysis of GSM733762
Reanalysis of GSM733768
Reanalysis of GSM733775
BioSample SAMN02197537
Named Annotation GSM936085_hg19_wgEncodeBroadHmmHsmmHMM.bed.gz
SRA SRX067388
SRA SRX067414
SRA SRX067418
SRA SRX067427
SRA SRX067453
SRA SRX067481
SRA SRX067492
SRA SRX067506
SRA SRX067511
SRA SRX067512
SRA SRX067513
SRA SRX067519
SRA SRX067526

Supplementary file Size Download File type/resource
GSM936085_hg19_wgEncodeBroadHmmHsmmHMM.bed.gz 5.9 Mb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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