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Sample GSM935347 Query DataSets for GSM935347
Status Public on May 22, 2012
Title USC_ChipSeq_HUVEC_GATA-2_UCDavis
Sample type SRA
Source name HUVEC
Organism Homo sapiens
Characteristics lab: USC
lab description: Farnham - University of Southern California
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: HUVEC
cell organism: human
cell description: umbilical vein endothelial cells
cell karyotype: normal
cell lineage: mesoderm
cell sex: U
treatment: None
treatment description: No special treatment or protocol applies
antibody: GATA-2
antibody antibodydescription: Rabbit polyclonal. Antibody Target: GATA2
antibody targetdescription: GATA binding protein 2
antibody vendorname: Donated by Dr. E.H. Bresnick, UW Madison
antibody vendorid: GATA-2
control: UCDavis
control description: Input library was prepared at UC Davis.
control: UCDavis
control description: Input library was prepared at UC Davis.
controlid: wgEncodeEH001759
replicate: 1
Biomaterial provider Lonza
Treatment protocol None
Growth protocol HUVEC_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
Data processing
Submission date May 22, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9052
Series (2)
GSE31477 ENCODE Transcription Factor Binding Sites by ChIP-seq from Stanford/Yale/USC/Harvard
GSE51334 DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions
SRA SRX150427
BioSample SAMN01000888
Named Annotation GSM935347_hg19_wgEncodeSydhTfbsHuvecGata2UcdSig.bigWig

Supplementary file Size Download File type/resource
GSM935347_hg19_wgEncodeSydhTfbsHuvecGata2UcdPk.narrowPeak.gz 591.4 Kb (ftp)(http) NARROWPEAK
GSM935347_hg19_wgEncodeSydhTfbsHuvecGata2UcdSig.bigWig 369.6 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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