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Sample GSM931109 Query DataSets for GSM931109
Status Public on Aug 27, 2012
Title genomic DNA from sample F1 dried blood spot (BeadChip)
Sample type genomic
 
Source name F1
Organism Homo sapiens
Characteristics sample id: F1
sample type: dried blood spot
tissue: blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted from dried blood spot samples using the GenSolve kit as per manufacturers instructures. DNA was extracted from other samples using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description normal dried blood spot sample
Data processing GenomeStudio softwarre
 
Submission date May 14, 2012
Last update date Aug 27, 2012
Contact name Thomas A Down
E-mail(s) thomas.down@gurdon.cam.ac.uk
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
 
Platform ID GPL13534
Series (2)
GSE37966 Guthrie card methylomics identifies temporally stable epialleles that are present at birth in humans (Methylation BeadChip)
GSE38128 Guthrie card methylomics identifies temporally stable epialleles that are present at birth in humans

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.6233856
cg00000108 0.9312771
cg00000109 0.8802516
cg00000165 0.1742151
cg00000236 0.776133
cg00000289 0.7190972
cg00000292 0.8515548
cg00000321 0.3018636
cg00000363 0.3963883
cg00000622 0.01480532
cg00000658 0.8362941
cg00000714 0.3874398
cg00000721 0.9157844
cg00000734 0.1146294
cg00000769 0.0460583
cg00000807 0.8530952
cg00000884 0.8671573
cg00000905 0.1237908
cg00000924 0.5450639
cg00000948 0.8495396

Total number of rows: 485577

Table truncated, full table size 10027 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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