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Sample GSM923585 Query DataSets for GSM923585
Status Public on Apr 30, 2012
Title PSU_ChipSeq_Erythrobl_Input
Sample type SRA
Source name Erythrobl
Organism Mus musculus
Characteristics lab: PSU-m
lab description: Hardison - Penn State University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: Erythrobl
cell organism: mouse
cell description: Erythroblast, ter119+ cells from liver
cell sex: B
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
age: E14.5
age description: Embryonic day 14.5
control: Input
control description: Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid: wgEncodeEM002350
replicate: 1
strain: CD-1
strain description: Multipurpose mouse used for safety testing, aging studies, surgical models and pseudopregnancy.
Biomaterial provider Mitch Weiss lab
Growth protocol Erythroblast__Hardison_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Apr 27, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9250
Series (4)
GSE36029 Transcription Factor Binding Sites by ChIP-seq from ENCODE/PSU
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
GSE51337 Divergent functions of hematopoietic transcription factors in lineage priming and differentiation during erythro-megakaryopoiesis
SRA SRX145065
BioSample SAMN00990270
Named Annotation GSM923585_mm9_wgEncodePsuTfbsErythroblInputBE14halfCd1InputRepSignalRep1.bigWig
Named Annotation GSM923585_mm9_wgEncodePsuTfbsErythroblInputBE14halfCd1InputRepSignalRep2.bigWig
Named Annotation GSM923585_mm9_wgEncodePsuTfbsErythroblInputBE14halfCd1InputSig.bigWig

Supplementary file Size Download File type/resource
GSM923585_mm9_wgEncodePsuTfbsErythroblInputBE14halfCd1InputRepSignalRep1.bigWig 2.7 Gb (ftp)(http) BIGWIG
GSM923585_mm9_wgEncodePsuTfbsErythroblInputBE14halfCd1InputRepSignalRep2.bigWig 2.5 Gb (ftp)(http) BIGWIG
GSM923585_mm9_wgEncodePsuTfbsErythroblInputBE14halfCd1InputSig.bigWig 4.1 Gb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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