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Sample GSM923578 Query DataSets for GSM923578
Status Public on Apr 30, 2012
Title PSU_ChipSeq_MEL_TAL1_(SC-12984)
Sample type SRA
Source name MEL
Organism Mus musculus
Characteristics lab: PSU-m
lab description: Hardison - Penn State University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: MEL
cell organism: mouse
cell description: Leukemia (K562 analog)
cell sex: U
antibody: TAL1_(SC-12984)
antibody antibodydescription: goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1
antibody targetdescription: TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.
antibody vendorname: Santa Cruz Biotech
antibody vendorid: sc-12984
age: immortalized
age description: Immortal cells
control: Input
control description: Control signal which may be subtracted from experimental raw signal before peaks are called.
controlid: wgEncodeEM001929
replicate: 1
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider Weissman lab
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Apr 27, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9250
Series (3)
GSE36029 Transcription Factor Binding Sites by ChIP-seq from ENCODE/PSU
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
GSE51334 DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions
SRA SRX145058
BioSample SAMN00990263
Named Annotation GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputRepSignalRep1.bigWig
Named Annotation GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputRepSignalRep2.bigWig
Named Annotation GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputSig.bigWig

Supplementary file Size Download File type/resource
GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputPk.broadPeak.gz 288.3 Kb (ftp)(http) BROADPEAK
GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputRepPeaksRep1.broadPeak.gz 222.8 Kb (ftp)(http) BROADPEAK
GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputRepPeaksRep2.broadPeak.gz 295.1 Kb (ftp)(http) BROADPEAK
GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputRepSignalRep1.bigWig 4.3 Gb (ftp)(http) BIGWIG
GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputRepSignalRep2.bigWig 4.7 Gb (ftp)(http) BIGWIG
GSM923578_mm9_wgEncodePsuTfbsMelTal1UImmortalC57bl6InputSig.bigWig 5.4 Gb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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