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Sample GSM912903 Query DataSets for GSM912903
Status Public on Apr 11, 2012
Title Stanford_ChipSeq_MEL_c-Myb_(SC-7874)_IgG-rab
Sample type SRA
Source name MEL
Organism Mus musculus
Characteristics lab: Stanford-m
lab description: Snyder - Stanford University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: MEL
cell organism: mouse
cell description: Leukemia (K562 analog)
cell sex: M
antibody: c-Myb_(SC-7874)
antibody antibodydescription: Rabbit polyclonal IgG, Epitope corresponding to amino acids 500-640 mapping at the C-terminus of c-Myb of human origin. Antibody Target: c-Myb
antibody targetdescription: Transcriptional activator; DNA-binding protein that specifically recognize the sequence 5'-YAAC[GT]G-3'. Plays an important role in the control of proliferation and differentiation of hematopoietic progenitor cells.
antibody vendorname: Santa Cruz Biotech
antibody vendorid: sc-7874
treatment: None
treatment description: No special treatment or protocol applies
control: IgG-rab
control description: Input signal from Normal Rabbit IgG ChIP-seq.
age: immortalized
age description: Immortal cells
control: IgG-rab
control description: Input signal from Normal Rabbit IgG ChIP-seq.
controlid: MEL/None/Input/IgG-rab
replicate: 1
strain: Unknown
strain description: Unknown strain origin
Biomaterial provider Weissman lab
Treatment protocol None
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Apr 11, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9250
Series (3)
GSE36030 Transcription Factor Binding Sites by ChIP-seq from ENCODE/Stanford/Yale
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
GSE51334 DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions
SRA SRX140366
BioSample SAMN00854826
Named Annotation GSM912903_mm9_wgEncodeSydhTfbsMelCmybsc7874IggrabSig.bigWig

Supplementary file Size Download File type/resource
GSM912903_mm9_wgEncodeSydhTfbsMelCmybsc7874IggrabPk.narrowPeak.gz 92.9 Kb (ftp)(http) NARROWPEAK
GSM912903_mm9_wgEncodeSydhTfbsMelCmybsc7874IggrabSig.bigWig 289.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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