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Sample GSM855765 Query DataSets for GSM855765
Status Public on Feb 01, 2013
Title 252800411749-2
Sample type RNA
 
Source name miR-199a-5p (2)
Organism Homo sapiens
Characteristics cell type: HFL1 fibroblast
amount in (µg): 0.0
rin number: 9
Extracted molecule total RNA
Extraction protocol Trizol+RNeasy+Minelute
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
Amplification protocol: cRNA Agilent
 
Hybridization protocol Agilent : 600.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description miR-199a-5p (2)
Data processing Feature extraction data processing (version 10.7.3.1)
 
Submission date Jan 03, 2012
Last update date Feb 01, 2013
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL13607
Series (2)
GSE34815 Impact of miR-199-5p overexpression and CAV1 silencing on human lung fibroblasts
GSE34818 MiR-199a-5p determines fibroblast activation and pulmonary fibrogenesis

Data table header descriptions
ID_REF
VALUE Quantile normalization of gMedianSignal from Feature Extraction quantification file

Data table
ID_REF VALUE
1 16.79768776
2 5.528035433
3 4.794415866
4 9.15915053
5 9.941414471
6 6.330916878
7 13.21095394
8 11.05428937
9 5.17990909
10 6.603626345
11 5.053731984
12 10.22997753
13 11.80688042
14 9.371387725
15 14.32295671
16 5.022367813
17 8.148930474
18 5.003216713
19 5.053731984
20 10.96770231

Total number of rows: 62976

Table truncated, full table size 1086 Kbytes.




Supplementary file Size Download File type/resource
GSM855765_252800411749_201104131430_S01_GE1_107_Sep09_1_2.txt.gz 12.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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