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Sample GSM855754 Query DataSets for GSM855754
Status Public on Feb 01, 2013
Title 252800411748-6
Sample type RNA
 
Source name Si-Neg (1)
Organism Homo sapiens
Characteristics cell type: HFL1 fibroblast
amount in (µg): 0.6
rin number: 9
Extracted molecule total RNA
Extraction protocol Trizol+RNeasy+Minelute
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
Amplification protocol: cRNA Agilent
 
Hybridization protocol Agilent : 600.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description Si-Neg (1)
Data processing Feature extraction data processing (version 10.7.3.1)
 
Submission date Jan 03, 2012
Last update date Feb 01, 2013
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL13607
Series (2)
GSE34815 Impact of miR-199-5p overexpression and CAV1 silencing on human lung fibroblasts
GSE34818 MiR-199a-5p determines fibroblast activation and pulmonary fibrogenesis

Data table header descriptions
ID_REF
VALUE Quantile normalization of gMedianSignal from Feature Extraction quantification file

Data table
ID_REF VALUE
1 13.11672106
2 4.920565533
3 4.920565533
4 8.697836358
5 10.41426996
6 7.918863237
7 13.23369457
8 9.619892439
9 5.139551352
10 7.554177691
11 5.286722764
12 9.527791148
13 11.00448384
14 8.877831874
15 14.421661
16 4.988684687
17 6.589784884
18 5.769129425
19 5.17990909
20 12.27495008

Total number of rows: 62976

Table truncated, full table size 1086 Kbytes.




Supplementary file Size Download File type/resource
GSM855754_252800411748_201104131418_S01_GE1_107_Sep09_2_2.txt.gz 12.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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