|
Status |
Public on Dec 28, 2012 |
Title |
Subject_5 [Illumina] |
Sample type |
genomic |
|
|
Source name |
Lymphoblast DNA
|
Organism |
Homo sapiens |
Characteristics |
subject: Subject_5 phenotype: Control
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA isolated using cold protein precipitation (Lahiri and Schnabel, 1993)
|
Label |
Cy5 and Cy3
|
Label protocol |
Illumina standard protocol
|
|
|
Hybridization protocol |
Illumina standard protocol
|
Scan protocol |
Illumina standard protocol
|
Description |
Lymphoblast isolated from whole blood
|
Data processing |
Beta values were convereted to M-values using the Du et al.(2010) conversion then z-transformed (normalized data)
|
|
|
Submission date |
Dec 29, 2011 |
Last update date |
Dec 28, 2012 |
Contact name |
Jeffrey Plume |
E-mail(s) |
jeffrey-plume@uiowa.edu
|
Organization name |
University of Iowa
|
Department |
Psychiatry
|
Lab |
Philibert
|
Street address |
500 Newton Rd.
|
City |
Iowa City |
State/province |
IA |
ZIP/Postal code |
52246 |
Country |
USA |
|
|
Platform ID |
GPL13534 |
Series (2) |
GSE34777 |
DNA methylation data from human lymphoblasts [Illumina] |
GSE34779 |
A cross platform genome wide comparison of the relationship of promoter DNA methylation to gene expression |
|