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Sample GSM855055 Query DataSets for GSM855055
Status Public on Dec 28, 2012
Title Subject_8 [Affymetrix]
Sample type RNA
 
Source name Homo sapien lymphoblast
Organism Homo sapiens
Characteristics tissue: Lymphoblast
subject: Subject_8
phenotype: Nicotine Dependent
Extracted molecule total RNA
Extraction protocol RNA isolated using the Ambion PureLinkā„¢ RNA Mini Kit following the manufacurer's protocol
Label biotin
Label protocol Labeled under contract by the University of Iowa DNA Facility
 
Hybridization protocol Hybridized under contract by the University of Iowa DNA Facility
Scan protocol Scanned under contract by the University of Iowa DNA Facility using the 2 Model 3000 GeneArray scanners
Description 5_female_ND_3-18-08_s1.CEL
Gene expression data isolated lymphoblasts
Data processing Quantile normalized with Partek genomic suite using default settings then z-scored
 
Submission date Dec 29, 2011
Last update date Dec 28, 2012
Contact name Jeffrey Plume
E-mail(s) jeffrey-plume@uiowa.edu
Organization name University of Iowa
Department Psychiatry
Lab Philibert
Street address 500 Newton Rd.
City Iowa City
State/province IA
ZIP/Postal code 52246
Country USA
 
Platform ID GPL570
Series (2)
GSE34776 Expression data from human lymphoblasts [Affymetrix]
GSE34779 A cross platform genome wide comparison of the relationship of promoter DNA methylation to gene expression

Data table header descriptions
ID_REF
VALUE Quantile normalized signal intensity

Data table
ID_REF VALUE
1007_s_at 8.23563
1053_at 8.99278
117_at 5.75185
121_at 7.38975
1255_g_at 4.40098
1294_at 8.39243
1316_at 4.99422
1320_at 4.15146
1405_i_at 6.82117
1431_at 3.98376
1438_at 4.48965
1487_at 7.8031
1494_f_at 5.07026
1552256_a_at 9.42785
1552257_a_at 9.356
1552258_at 4.75015
1552261_at 5.12006
1552263_at 8.01184
1552264_a_at 8.56394
1552266_at 3.56574

Total number of rows: 54675

Table truncated, full table size 998 Kbytes.




Supplementary file Size Download File type/resource
GSM855055.CEL.gz 4.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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