NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM841007 Query DataSets for GSM841007
Status Public on Dec 01, 2011
Title B6C3Fe a/a-bpck mutant
Sample type RNA
 
Source name B6C3Fe a/a-bpck mutant
Organism Mus musculus
Characteristics tissue: kidney
genotype/variation: B6C3Fe a/a-bpck mutant
age: postnatal 3 days
Treatment protocol Animal care and experimental procedures conformed to National Institutes of Health guidelines and were approved by the Institutional Animal Care and Use Committee at the University of Louisville (protocol # 09014), Louisville, KY.
Growth protocol mice were maintained at the Research and Resource Center at University of Louisville.
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 100ng total RNA
 
Hybridization protocol Following fragmentation,30μl of cRNA were hybridized for 16 hr at 45℃ on Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
Scan protocol GeneChips were scanned using the GeneArray Scanner 3000 7G 4C.
Description Mouse in fast phase of renal corpuscle proliferation
Data processing The data were analyzed with dChip (Dec.2010 version)
 
Submission date Nov 30, 2011
Last update date Dec 07, 2011
Contact name E Du
E-mail(s) duedoc@126.com
Organization name Tianjin institude of Urology
Street address ping jiang road 23#, Hexi district
City Tianjin
ZIP/Postal code 300211
Country China
 
Platform ID GPL1261
Series (1)
GSE34051 Expression profiling of the early postnatal stage of Polycystic Kidney Disease in the B6C3Fe a/a-bpck mice

Data table header descriptions
ID_REF
VALUE dChip signal
SE

Data table
ID_REF VALUE SE
1415670_at 325.78 2.88
1415671_at 427.78 3.92
1415672_at 1093.32 15.06
1415673_at 203.65 1
1415674_a_at 268.2 3.19
1415675_at 129.97 2.82
1415676_a_at 749.62 1.82
1415677_at 264.9 1.06
1415678_at 349.43 5.05
1415679_at 569.47 5.03
1415680_at 279.68 5.38
1415681_at 330.19 4.69
1415682_at 104.27 1.22
1415683_at 542.45 4.8
1415684_at 147.29 2.26
1415685_at 98.93 1.66
1415686_at 485.41 5.57
1415687_a_at 948.48 2.49
1415688_at 594.82 8.19
1415689_s_at 196.69 5.17

Total number of rows: 45037

Table truncated, full table size 963 Kbytes.




Supplementary file Size Download File type/resource
GSM841007.CEL.gz 3.0 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap