|
| Status |
Public on Jul 04, 2024 |
| Title |
pupae rep 3 |
| Sample type |
SRA |
| |
|
| Source name |
whole body
|
| Organism |
Cnaphalocrocis medinalis |
| Characteristics |
tissue: whole body
treatment: pupae
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Two fifth instar larvae and two pupae of the rice leaf folder were placed in separate centrifuge tubes containing TRIzol reagent, with each treatment performed in three biological replicates.
The experiment utilized the Illumina TruSeq Small RNA reagent kit to construct the library.
|
| |
|
| Library strategy |
miRNA-Seq |
| Library source |
transcriptomic |
| Library selection |
size fractionation |
| Instrument model |
Illumina HiSeq 2500 |
| |
|
| Data processing |
Using the FASTX-Toolkit software to converts data from Solexa format to FASTA format
Assembly: Cnaphalocrocis medinalis NCBI genome
Supplementary files format and content: fasta
|
| |
|
| Submission date |
Jul 01, 2024 |
| Last update date |
Jul 04, 2024 |
| Contact name |
zhu yu |
| E-mail(s) |
yuzhu@zju.edu.cn
|
| Organization name |
Wenzhou Vocational College of Science and Technology
|
| Street address |
ouhai district, liuhongqiao road
|
| City |
wenzhou |
| ZIP/Postal code |
325006 |
| Country |
China |
| |
|
| Platform ID |
GPL34666 |
| Series (1) |
| GSE271187 |
Small RNA sequencing based identification of miRNAs in Cnaphalocrocis medinalis |
|
| Relations |
| BioSample |
SAMN42193155 |
| SRA |
SRX25166040 |
