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Status
Public on Feb 12, 2002
Title
CGH_Albertson_SW837
Sample type
genomic
Channel 1 Source name
Cell line SW837
Organism
Homo sapiens Extracted molecule
genomic DNA
Channel 2 Source name
normal male reference genomic DNA
Organism
Homo sapiens Extracted molecule
genomic DNA
Description
ATCC cell line <a href="http://www.atcc.org/SearchCatalogs/longview.cfm?view=ce,413536,CCL-235&text=SW837 ">CCL-235</a>.
Submission date
Jan 17, 2002
Last update date
May 27, 2005
Contact name
Donna G Albertson
E-mail(s)
albertson@cc.ucsf.edu Phone
415 502-8463
Organization name
University of California San Francisco
Department
Comprehensive Cancer Center
Street address
City
San Francisco
State/province
CA
ZIP/Postal code
94143
Country
USA
Platform ID
GPL28 Series (1)
GSE16 Microarray-based CGH in human cancer cell lines
Data table header descriptions ID_REF Unique row identifier, genome position order
VALUE aka LOG2RATIO, mean of log base 2 of LINEAR_RATIO
LINEAR_RATIO Mean of replicate Cy3/Cy5 ratios
LOG2STDDEV Standard deviation of VALUE
NO_REPLICATES Number of replicate spot measurements
Data table ID_REF VALUE LINEAR_RATIO LOG2STDDEV NO_REPLICATES 1
-0.114321
0.923817
0.014381
3
2
0
3
-0.153247
0.899225
0.00149
3
4
-0.126188
0.916249
0.010102
3
5
0.026325
1.018414
0.009168
3
6
1.139264
0
1
7
-0.001906
0.99868
0.0127
3
8
0.006051
1.004203
0.012
3
9
-0.01253
0.991353
0.010464
3
10
-0.047807
0.967406
0.014517
3
11
0.057964
1.040996
0.009486
3
12
0
13
0.035833
1.025149
0.016312
3
14
0.09022
1.064533
0.027633
3
15
0.056542
1.03997
0.006559
3
16
0.07447
1.052974
0.016809
3
17
0.115687
1.083491
0.013396
3
18
0.175038
1.128994
0.006978
2
19
0.057185
1.040433
0.012689
3
20
-0.012626
0.991287
0.035961
3
2463 75 Kbytes .Supplementary data files not provided
