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Sample GSM816 Query DataSets for GSM816
Status Public on Feb 12, 2002
Title CGH_Albertson_S1514-010328
Sample type genomic
 
Channel 1
Source name Cell line S1514
Organism Homo sapiens
Extracted molecule genomic DNA
 
Channel 2
Source name normal male reference genomic DNA
Organism Homo sapiens
Extracted molecule genomic DNA
 
 
Description A breast carcinoma cell line.
 
Submission date Jan 17, 2002
Last update date May 27, 2005
Contact name Donna G Albertson
E-mail(s) albertson@cc.ucsf.edu
Phone 415 502-8463
Organization name University of California San Francisco
Department Comprehensive Cancer Center
Street address
City San Francisco
State/province CA
ZIP/Postal code 94143
Country USA
 
Platform ID GPL28
Series (1)
GSE16 Microarray-based CGH in human cancer cell lines

Data table header descriptions
ID_REF Unique row identifier, genome position order
VALUE aka LOG2RATIO, mean of log base 2 of LINEAR_RATIO
LINEAR_RATIO Mean of replicate Cy3/Cy5 ratios
LOG2STDDEV Standard deviation of VALUE
NO_REPLICATES Number of replicate spot measurements

Data table
ID_REF VALUE LINEAR_RATIO LOG2STDDEV NO_REPLICATES
1 0.108688 1.078247 0.111913 2
2 0
3 -0.028825 0.980218 0.006516 3
4 0.003824 1.002654 0.004981 3
5 1.009254 0 1
6 0
7 0.130779 1.094885 0.0023 3
8 0.070617 1.050166 0.00664 3
9 0.003084 1.00214 0.010578 3
10 -0.066244 0.955122 0.00695 3
11 -0.037681 0.97422 0.011001 3
12 0.039233 1.027567 0.008459 3
13 0.227938 1.17116 0.013576 3
14 0.020826 1.01454 0.019966 3
15 0.162303 1.119072 0.015005 3
16 -0.04853 0.966921 0.017189 3
17 0.150462 1.109925 0.005896 3
18 0.046338 1.032641 0.016376 3
19 0.05779 1.04087 0.020609 3
20 -0.015021 0.989642 0.003767 3

Total number of rows: 2463

Table truncated, full table size 77 Kbytes.




Supplementary data files not provided
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