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Sample GSM802154 Query DataSets for GSM802154
Status Public on Nov 30, 2011
Title Psoriasis-3 +placebo
Sample type RNA
Source name Psoriasis-3 +placebo
Organism Homo sapiens
Characteristics disease state: psoriasis
group: placebo
Extracted molecule total RNA
Extraction protocol Whole skin punch biopsies were homogenized in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA).
Label biotin
Label protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
Hybridization protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Data processing GCRMA (using gcrma package from R/Bioconductor)
Submission date Sep 27, 2011
Last update date Nov 30, 2011
Contact name Mayte Suarez-Farinas
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
Platform ID GPL571
Series (1)
GSE32407 A single intradermal injection of IFN-γ induces a psoriasis-like state in both non-lesional psoriatic and healthy skin

Data table header descriptions
VALUE Normalized Expression values in log-2 scale

Data table
1007_s_at 11.30991024
1053_at 7.156725616
117_at 4.616781133
121_at 7.462469984
1255_g_at 2.082593469
1294_at 6.844814834
1316_at 2.083403972
1320_at 4.56302057
1405_i_at 4.107483124
1431_at 4.835509966
1438_at 3.314890358
1487_at 7.290010078
1494_f_at 2.082593469
1598_g_at 13.46105469
160020_at 7.97148224
1729_at 9.992804396
1773_at 2.234436818
177_at 7.394931698
179_at 2.082593469
1861_at 4.597049873

Total number of rows: 22277

Table truncated, full table size 497 Kbytes.

Supplementary file Size Download File type/resource
GSM802154.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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