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Sample GSM800839 Query DataSets for GSM800839
Status Public on Nov 30, 2011
Title pre-B_3h_EtOH_rep1
Sample type RNA
Source name B to M transdifferentiation sample
Organism Mus musculus
Characteristics cell type: Bone marrow derived cells (pre-B)
infection: C/EBPaER-GFP retrovirus
agent: EtOH
time: 3h
Treatment protocol GFP pos. cells were sorted and afetr re-seeding on stroma induced with b-Est. GFP pos cell were sorted at different imes thereafter
Growth protocol Pre-B cells were isolated, placed in duplicate on stromal cells plus cytokines, infected with an C/EBPaER-GFP retrovirus, GFP pos. cells sorted and after re-seeding on stroma induced with b-Est. Green cells were sorted at different times
Extracted molecule total RNA
Extraction protocol RNA was isolated by Trizol
Label Biotin
Label protocol RNAs were processed for Affymetrix 430.2 arrays as described in the manufacturer's instructions
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description Gene expression data from B to M transdifferentiation
Data processing The data have been normalized with RMA method, using Bioconductor in R
Submission date Sep 23, 2011
Last update date Nov 30, 2011
Contact name Thien-Phong Vu Manh
Organization name CIML
Street address 163 avenue de Luminy
City marseille
ZIP/Postal code 13288
Country France
Platform ID GPL1261
Series (1)
GSE32330 Expression data from C/EBP alpha induced transdifferentiation of pre-B cells into macrophages

Data table header descriptions
VALUE log2 normalized signal

Data table
1415670_at 8.9988232103016
1415671_at 8.5209081782015
1415672_at 9.84641696614336
1415673_at 8.79617667035765
1415674_a_at 8.25956425364535
1415675_at 8.82161140783972
1415676_a_at 11.6346152639409
1415677_at 6.66626506760508
1415678_at 10.1775731053180
1415679_at 10.5936117153725
1415680_at 10.5376610785225
1415681_at 8.6736884196504
1415682_at 6.90881172564012
1415683_at 11.8087401899505
1415684_at 6.81794307592297
1415685_at 7.84415769686744
1415686_at 9.1125593201129
1415687_a_at 9.6108185927984
1415688_at 10.0507734254743
1415689_s_at 8.54588530322061

Total number of rows: 45101

Table truncated, full table size 1246 Kbytes.

Supplementary file Size Download File type/resource
GSM800839.CEL.gz 3.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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