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Sample GSM794235 Query DataSets for GSM794235
Status Public on May 29, 2012
Title 252800411761-4
Sample type RNA
 
Source name si-Spt6 (A)
Organism Homo sapiens
Characteristics amount in (µg): 0.2
cell line: HeLa-LTR-luc
rin number: 9
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
 
Hybridization protocol Agilent : 600.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description si-Spt6 (A)
Data processing Feature extraction data processing. log2(signal) normalized with quantile method (R bioconductor).
 
Submission date Sep 09, 2011
Last update date May 29, 2012
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL13607
Series (1)
GSE32033 Spt6 Levels are Modulated by PAAF1 and 26S Proteasome to Regulate the HIV-1 LTR and a Subset of Cellular Genes involved in Cancer.

Data table header descriptions
ID_REF
VALUE log2(signal) normalized with quantile method (R bioconductor).

Data table
ID_REF VALUE
1 15.48042471
2 5.199672345
3 5.251087854
4 7.638435914
5 9.08900902
6 8.108959987
7 12.89694727
8 9.954923292
9 5.163230349
10 6.13442632
11 5.880603904
12 10.0726909
13 9.777529305
14 8.681238412
15 12.1850819
16 5.426264755
17 7.140403757
18 5.339850003
19 5.339850003
20 10.46883614

Total number of rows: 62976

Table truncated, full table size 1087 Kbytes.




Supplementary file Size Download File type/resource
GSM794235_252800411761_201104131442_S01_GE1_107_Sep09_1_4.txt.gz 12.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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