NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM794234 Query DataSets for GSM794234
Status Public on May 29, 2012
Title 252800411761-6
Sample type RNA
 
Source name si-Neg (B)
Organism Homo sapiens
Characteristics amount in (µg): 0.2
cell line: HeLa-LTR-luc
rin number: 9
Extracted molecule total RNA
Extraction protocol Qiagen
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
 
Hybridization protocol Agilent : 600.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description si-Neg (B)
Data processing Feature extraction data processing. log2(signal) normalized with quantile method (R bioconductor).
 
Submission date Sep 09, 2011
Last update date May 29, 2012
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL13607
Series (1)
GSE32033 Spt6 Levels are Modulated by PAAF1 and 26S Proteasome to Regulate the HIV-1 LTR and a Subset of Cellular Genes involved in Cancer.

Data table header descriptions
ID_REF
VALUE log2(signal) normalized with quantile method (R bioconductor).

Data table
ID_REF VALUE
1 15.17059015
2 5.241585986
3 5.159871337
4 7.799011732
5 10.57427815
6 7.808427957
7 12.62216624
8 9.88614111
9 5.159871337
10 6.50779464
11 5.90488546
12 10.04251439
13 9.613252305
14 8.850837961
15 14.64108272
16 5.333900736
17 7.475057854
18 5.159871337
19 5.662965013
20 10.22601072

Total number of rows: 62976

Table truncated, full table size 1087 Kbytes.




Supplementary file Size Download File type/resource
GSM794234_252800411761_201104131442_S01_GE1_107_Sep09_2_2.txt.gz 12.2 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap