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Sample GSM789251 Query DataSets for GSM789251
Status Public on Jan 05, 2012
Title 252665511344-2
Sample type RNA
 
Source name Mantle cell lymphoma
Organism Mus musculus
Characteristics tissue: Lymph node
amount in (µg): 0.2
origin: Mantle cell lymphoma
genotype: c-myc-3'RR/p53+/-
strain: Black 6
developmental stage: Mature B cell
disease: Lymphoma
rin number: 8
Extracted molecule total RNA
Extraction protocol Chomzynski, total RNA extraction
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
 
Hybridization protocol Agilent : 1650.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description 252665511344-2
Data processing Feature extraction data processing. Quantile interslide normalization.
 
Submission date Sep 01, 2011
Last update date Jan 05, 2012
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL10333
Series (1)
GSE31814 c-myc-3'RR/p53+/- mice lymphomas

Data table header descriptions
ID_REF
VALUE log2 normalized signal

Data table
ID_REF VALUE
12 8.1031559
13 5.52939849
14 5.456203208
15 6.890259627
16 11.63643117
17 10.6020054
18 5.52939849
19 5.386245213
20 6.079227139
21 5.26729124
22 8.814514959
23 12.46762134
24 10.38602035
25 10.15037753
26 5.26729124
27 15.05214389
28 8.862949448
30 10.85457266
31 12.73309607
32 5.169989449

Total number of rows: 43209

Table truncated, full table size 745 Kbytes.




Supplementary file Size Download File type/resource
GSM789251_252665511344_201105261127_S01_GE1_107_Sep09_1_2.txt.gz 9.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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