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Sample GSM789249 Query DataSets for GSM789249
Status Public on Jan 05, 2012
Title 252665511343-4
Sample type RNA
 
Source name Plasma cell lymphoma
Organism Mus musculus
Characteristics tissue: Lymph node
amount in (µg): 0.2
origin: Plasma cell lymphoma
genotype: c-myc-3'RR/p53+/-
strain: Black 6
developmental stage: Mature B cell
disease: Lymphoma
rin number: 10
Extracted molecule total RNA
Extraction protocol Chomzynski, total RNA extraction
Label Cy3
Label protocol Agilent - Low RNA input QuickAmp
 
Hybridization protocol Agilent : 1650.0 ng at 65 degree_C during 17 hours
Scan protocol Arrays were scanned using the Agilent SureScan High Resolution Scanner.
Description 252665511343-4
Data processing Feature extraction data processing. Quantile interslide normalization.
 
Submission date Sep 01, 2011
Last update date Mar 15, 2012
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
 
Platform ID GPL10333
Series (1)
GSE31814 c-myc-3'RR/p53+/- mice lymphomas

Data table header descriptions
ID_REF
VALUE log2 normalized signal

Data table
ID_REF VALUE
12 8.156163146
13 5.736983214
14 6.469870907
15 6.67564342
16 12.41800827
17 9.437570784
18 5.498209443
19 5.561836946
20 6.019562314
21 5.561836946
22 9.287069278
23 15.10480092
24 10.29936288
25 9.838566529
26 5.151300872
27 14.80116973
28 6.432684796
30 12.8308662
31 13.37171099
32 5.362177536

Total number of rows: 43209

Table truncated, full table size 746 Kbytes.




Supplementary file Size Download File type/resource
GSM789249_252665511343_201105261115_S01_GE1_107_Sep09_1_4.txt.gz 9.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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