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Sample GSM7877284 Query DataSets for GSM7877284
Status Public on Mar 01, 2024
Title week 2 aristolochic acid_FB
Sample type SRA
Source name kidney
Organism Mus musculus
Characteristics strain: C57BL/6
tissue: kidney
cell type: Cd45+ FACS immune cells
gender: male
disease state: Chronic kidney disease/ transition of acute kidney injury-to-chronic kidney disease
Extracted molecule polyA RNA
Extraction protocol Cells were isolated, tagged with hashing antibodies, and combined (week 2 samples combined and week 6 samples combined separately) for multiplex sequencing, and sequenced per 10x genomics instruction.
Library strategy RNA-Seq
Library source transcriptomic single cell
Library selection cDNA
Instrument model Illumina NovaSeq 6000
Description 10X Genomics
W2_1 was B0301, W2_2 was B0302, W2_3 was B0303
Data processing Libraries were multiplex sequenced and processed following 10X Genomics protocol for CellRanger.
Assembly: mm10
Submission date Nov 01, 2023
Last update date Mar 01, 2024
Contact name Kyle Hartley Moore
Organization name University of Alabama at Birmingham
Department Division of Nephrology
Lab Anupam Agarwal
Street address 703 19th St. S.
City Birmingham
State/province Alabama
ZIP/Postal code 35294
Country USA
Platform ID GPL24247
Series (1)
GSE246803 Cognate antigen-independent differentiation of resident memory t cells in chronic kidney disease
BioSample SAMN38066139
SRA SRX22333080

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA

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