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Sample GSM7711098 Query DataSets for GSM7711098
Status Public on Dec 05, 2023
Title Female Hippocampus_dflox control_rep4
Sample type RNA
 
Source name hippocampus, dflox control
Organism Mus musculus
Characteristics gender: female
strain: C57BL/6
genotype: dflox control
tissue: hippocampus
Extracted molecule total RNA
Extraction protocol Total RNA for microarray analysis was isolated from the whole hippocampus of adult male and female dflox control and GREmx1-cre, MREmx1-cre, and GRMREmx1-cre mice using the RNeasy Mini Kit (Qiagen) and RNase-Free DNase Kit (Qiagen).
Label Cy3
Label protocol Starting with 500ng of total RNA, Cy3 labeled cRNA was produced according to manufacturer’s protocol.
 
Hybridization protocol For each sample, 1.65ug of Cy3 labeled cRNAs were fragmented and hybridized for 17 hours in a rotating hybridization oven.
Scan protocol Slides were washed and then scanned with an Agilent Scanner.
Description Gene expression from female hippocampus, dflox control
Data processing Data was obtained using the Agilent Feature Extraction software (v12.0), using the 1-color defaults for all parameters.
 
Submission date Aug 15, 2023
Last update date Dec 05, 2023
Contact name NIEHS Microarray Core
E-mail(s) microarray@niehs.nih.gov, liuliw@niehs.nih.gov
Organization name NIEHS
Department DIR
Lab Microarray Core
Street address 111 T.W. Alexander Drive
City RTP
State/province NC
ZIP/Postal code 27709
Country USA
 
Platform ID GPL7202
Series (1)
GSE240873 Glucocorticoid and Mineralocorticoid Receptor Signaling have Sex-dependent and Independent Effects in Mouse Hippocampus

Data table header descriptions
ID_REF
VALUE Signal intensity

Data table
ID_REF VALUE
A_52_P616356 4.47378
A_52_P580582 65.9553
A_52_P403405 4.46274
A_52_P819156 52.1395
A_51_P331831 227.994
A_51_P430630 4.41957
A_52_P502357 42.8336
A_52_P299964 23.0663
A_51_P356389 32.4623
A_52_P684402 850.289
A_51_P414208 4.33583
A_51_P280918 3666.83
A_52_P613688 570.888
A_52_P258194 24589.4
A_52_P229271 11.0581
A_52_P214630 1450.79
A_52_P579519 337.817
A_52_P979997 4.19487
A_52_P453864 1556.33
A_52_P655842 41.4045

Total number of rows: 41174

Table truncated, full table size 837 Kbytes.




Supplementary file Size Download File type/resource
GSM7711098_US22502532_251486841475_S01_GE1_1200_Jun14_1_4.txt.gz 2.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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