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Sample GSM769027 Query DataSets for GSM769027
Status Public on Jul 30, 2011
Title LICR_ChipSeq_Cerebellum_H3K4me3
Sample type SRA
Source name Cerebellum
Organism Mus musculus
Characteristics biomaterial_type: tissue
donor_id: ENCDO956IXV
tissue_type: cerebellum
lab: LICR-m
lab description: Ren - Ludwig Institue for Cancer Research
datatype: ChipSeq
datatype description: ChIP-Seq
cell: Cerebellum
cell organism: mouse
cell description: Cerebellum
cell sex: M
antibody: H3K4me3
antibody antibodydescription: rabbit polyclonal
antibody targetdescription: Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.
antibody vendorname: Millipore
antibody vendorid: 07-473
age: adult-8wks
age description: Adult 8 weeks
control: std
control description: Standard input signal for most experiments.
controlid: Cerebellum/Input/std
labversion: 5/26/09 Lane 6
replicate: 1
replicate description: tier 1
softwareversion: ELAND
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider LICR lab
Growth protocol Cerebellum_Ren_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer II
Data processing
Submission date Jul 29, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL9250
Series (2)
GSE31039 Histone Modifications by ChIP-seq from ENCODE/LICR
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
SRA SRX085450
BioSample SAMN00690342
Named Annotation GSM769027_wgEncodeLicrHistoneCbellumH3k4me3MAdult8wksC57bl6StdSig.bigWig

Supplementary file Size Download File type/resource
GSM769027_wgEncodeLicrHistoneCbellumH3k4me3MAdult8wksC57bl6StdPk.broadPeak.gz 283.9 Kb (ftp)(http) BROADPEAK
GSM769027_wgEncodeLicrHistoneCbellumH3k4me3MAdult8wksC57bl6StdSig.bigWig 22.3 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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