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Sample GSM765870 Query DataSets for GSM765870
Status Public on Jun 13, 2012
Title A30NEW
Sample type genomic
Source name Nonagenarians
Organism Homo sapiens
Characteristics age: 91 years
disease status: healthy sample
tissue: Whole blood
cell type: PBMNC
Extracted molecule genomic DNA
Extraction protocol Total DNA was isolated by standard procedures
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Data processing Genome Studio V2011.2, [(Unmethylated and methylated) signal_intensities.txt is provided as a Series supplementary file]
Submission date Jul 22, 2011
Last update date Jun 13, 2012
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
Platform ID GPL13534
Series (1)
GSE30870 DNA methylomes of Newborns and Nonagenarians

Data table header descriptions
VALUE Average Beta
Detection Pval

Data table
ID_REF VALUE Detection Pval
cg00000029 0.4821764 0
cg00000108 0.928959 0
cg00000109 0.8370636 0
cg00000165 0.2173528 0
cg00000236 0.7176313 0
cg00000289 0.6286237 0
cg00000292 0.8177935 0
cg00000321 0.3374513 0
cg00000363 0.4952204 0
cg00000622 0.03174899 0
cg00000658 0.8126501 0
cg00000714 0.1825275 0
cg00000721 0.9004055 0
cg00000734 0.1139554 0
cg00000769 0.09363346 0
cg00000807 0.8469868 0
cg00000884 0.8646232 0
cg00000905 0.1438291 0
cg00000924 0.5245468 0
cg00000948 0.8454983 0

Total number of rows: 485577

Table truncated, full table size 10957 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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