|
| Status |
Public on Dec 06, 2023 |
| Title |
Edom_NSph_untreated |
| Sample type |
genomic |
| |
|
| Source name |
untreated Edom-NSph
|
| Organism |
Homo sapiens |
| Characteristics |
gender: female
sample type: iPSC-derived neurosphere
disease state: normal
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Genomic DNA was extracted and purified from neurosphere samples using Qiagen DNeasy Blood & Tissue Kit according to standard instructions
|
| Label |
Cy3 and Cy5
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulfite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human MethylationEPIC Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
Untreated Edom-iPSC-derived neurosphere (NSph)
Epi_NSph_Non
|
| Data processing |
GenomeStudio software V2011.1
|
| |
|
| Submission date |
Jun 16, 2023 |
| Last update date |
Dec 06, 2023 |
| Contact name |
Yoshikazu Arai |
| E-mail(s) |
ayoshiy55@gmail.com
|
| Organization name |
University of Miyazaki
|
| Department |
Faculty of Agriculture
|
| Lab |
Veterinary Biochemistry and Molecular Biology
|
| Street address |
Gakuen-Kibahadai-Nishi1-1
|
| City |
Miyazaki |
| ZIP/Postal code |
8892192 |
| Country |
Japan |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE235146 |
DNA methylation profiles in human iPSC-derived neurosphere exposed to environmental chemicals |
|
