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Sample GSM742285 Query DataSets for GSM742285
Status Public on Mar 15, 2012
Title Ko Nkx2-5cre, Ezh2f/f E12.5 apx
Sample type SRA
 
Source name embryonic cardiomyocytes at E12.5
Organism Mus musculus
Characteristics cell type: cardiomyocyte
age: E12.5
genotype: Ko Nkx2-5cre, Ezh2f/f E12.5 apx
Extracted molecule total RNA
Extraction protocol Full-length transcript RNA-seq library preparation kit
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 2000
 
Data processing All p-values were corrected for multiple concurrent hypothesis testing using the Benjamini-Hochberg method. We used the false discovery rate < 1% and fold change of greater than 50% as the significance threshold.
 
Submission date Jun 15, 2011
Last update date Jun 11, 2013
Contact name Michael Hsing
Organization name Children's Hospital Boston
Department Cardiology
Street address 300 Longwood Ave.
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL13112
Series (2)
GSE29992 Genome-wide profiling of E12.5 cardiomyocytes RNA expression in both heterozygous control and mutant
GSE29997 Ezh2 and H3K27me3 in cardiomyocytes
Relations
BioSample SAMN02198254

Supplementary file Size Download File type/resource
GSM742285_KO2.txt.gz 902.5 Kb (ftp)(http) TXT
Processed data provided as supplementary file
Processed data are available on Series record

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