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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Oct 12, 2023 |
| Title |
TS-TissueClocks_Pool1 |
| Sample type |
SRA |
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| Source name |
Ear Skin, Liver, Kidney, White fat
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| Organism |
Mus musculus |
| Characteristics |
tissue: Ear Skin, Liver, Kidney, White fat
strain: C57BL/6
age: various
Sex: mixed
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
https://www.biorxiv.org/content/10.1101/2021.10.25.465725v3
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| Library strategy |
OTHER |
| Library source |
genomic |
| Library selection |
other |
| Instrument model |
Illumina NovaSeq 6000 |
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| Description |
bisulfite converted DNA
TS-TissueClocks.tar.gz
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| Data processing |
https://github.com/patricktgriffin/TIME-Seq
Assembly: mm10,hg19
Supplementary files format and content: bismark.cov
Library strategy: TIME-Seq
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| Submission date |
May 11, 2023 |
| Last update date |
Oct 12, 2023 |
| Contact name |
Patrick T Griffin |
| Organization name |
Patrick Griffin
|
| Department |
Harvard Medical School, Dept. of Genetics
|
| Lab |
Sinclair
|
| Street address |
77 Avenue Louis Pasteur
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| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
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| Platform ID |
GPL24247 |
| Series (2) |
| GSE232346 |
TIME-Seq Enables Scalable and Inexpensive Epigenetic Age Predictions |
| GSE245630 |
TIME-Seq Enables Scalable and Inexpensive Epigenetic Age Predictions. |
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| Relations |
| BioSample |
SAMN35051980 |
| SRA |
SRX20301812 |
| Supplementary data files not provided |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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