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Sample GSM714158 Query DataSets for GSM714158
Status Public on Jun 01, 2011
Title BT5
Sample type RNA
Source name Large airway epithelial cells
Organism Homo sapiens
Characteristics cell type: large airway epithelial cells
disease state: Lung Cancer
gender: F
age: 63
packyears: >20
smoking status: Current
years passed since quitting: 0
cancer stage: IV
histology: Non-Small-Cell Carcinoma
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Data processing RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
Submission date Apr 25, 2011
Last update date Jun 01, 2011
Contact name Avrum Spira
Phone 617-638-4860
Fax 617-536-8093
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platform ID GPL13447
Series (2)
GSE28835 Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule
GSE29007 Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer

Data table header descriptions
VALUE log2 RMA signal

Data table
AFFX-BioB-3_at 7.678116778
AFFX-BioB-5_at 8.048639992
AFFX-BioB-M_at 8.23366008
AFFX-BioC-3_at 9.622149689
AFFX-BioC-5_at 9.32961635
AFFX-BioDn-3_at 11.82702757
AFFX-BioDn-5_at 10.59699762
AFFX-CreX-3_at 13.49066641
AFFX-CreX-5_at 13.16216285
AFFX-DapX-3_at 10.96841035
AFFX-DapX-5_at 9.250317128
AFFX-DapX-M_at 10.79985806
AFFX-HSAC07/X00351_3_at 12.56112016
AFFX-HSAC07/X00351_5_at 10.63498578
AFFX-HSAC07/X00351_M_at 11.59644139
AFFX-hum_alu_at 14.39982603
AFFX-HUMGAPDH/M33197_3_at 12.47198634
AFFX-HUMGAPDH/M33197_5_at 11.80352452
AFFX-HUMGAPDH/M33197_M_at 12.12085902
AFFX-HUMISGF3A/M97935_3_at 9.006043546

Total number of rows: 11914

Table truncated, full table size 359 Kbytes.

Supplementary file Size Download File type/resource
GSM714158.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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