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Sample GSM714157 Query DataSets for GSM714157
Status Public on Jun 01, 2011
Title BT4
Sample type RNA
Source name Large airway epithelial cells
Organism Homo sapiens
Characteristics cell type: large airway epithelial cells
disease state: Lung Cancer
gender: M
age: 72
packyears: 90
smoking status: Former
years passed since quitting: 22
cancer stage: IV
histology: Adenocarcinoma
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Data processing RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
Submission date Apr 25, 2011
Last update date Jun 01, 2011
Contact name Avrum Spira
Phone 617-638-4860
Fax 617-536-8093
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platform ID GPL13447
Series (2)
GSE28835 Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule
GSE29007 Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer

Data table header descriptions
VALUE log2 RMA signal

Data table
AFFX-BioB-3_at 9.193644143
AFFX-BioB-5_at 9.327663768
AFFX-BioB-M_at 9.495452831
AFFX-BioC-3_at 10.69824618
AFFX-BioC-5_at 10.54717773
AFFX-BioDn-3_at 12.37176283
AFFX-BioDn-5_at 11.42686694
AFFX-CreX-3_at 13.63310213
AFFX-CreX-5_at 13.3515573
AFFX-DapX-3_at 11.74182485
AFFX-DapX-5_at 10.56294431
AFFX-DapX-M_at 11.50930455
AFFX-HSAC07/X00351_3_at 12.65530083
AFFX-HSAC07/X00351_5_at 9.682390691
AFFX-HSAC07/X00351_M_at 10.93400082
AFFX-hum_alu_at 14.43123249
AFFX-HUMGAPDH/M33197_3_at 12.44439661
AFFX-HUMGAPDH/M33197_5_at 11.07381783
AFFX-HUMGAPDH/M33197_M_at 11.6729814
AFFX-HUMISGF3A/M97935_3_at 11.14738766

Total number of rows: 11914

Table truncated, full table size 359 Kbytes.

Supplementary file Size Download File type/resource
GSM714157.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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