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Sample GSM714156 Query DataSets for GSM714156
Status Public on Jun 01, 2011
Title BT2
Sample type RNA
Source name Large airway epithelial cells
Organism Homo sapiens
Characteristics cell type: large airway epithelial cells
disease state: Lung Cancer
gender: M
age: 72
packyears: >60
smoking status: Current
years passed since quitting: 0
cancer stage: IIA
histology: Adenocarcinoma
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Data processing RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
Submission date Apr 25, 2011
Last update date Jun 01, 2011
Contact name Avrum Spira
Phone 617-638-4860
Fax 617-536-8093
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platform ID GPL13447
Series (2)
GSE28835 Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule
GSE29007 Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer

Data table header descriptions
VALUE log2 RMA signal

Data table
AFFX-BioB-3_at 8.88266111
AFFX-BioB-5_at 8.87851869
AFFX-BioB-M_at 9.170190166
AFFX-BioC-3_at 10.32447448
AFFX-BioC-5_at 10.05624067
AFFX-BioDn-3_at 12.3255436
AFFX-BioDn-5_at 11.1345061
AFFX-CreX-3_at 13.62106393
AFFX-CreX-5_at 13.1749034
AFFX-DapX-3_at 11.60300962
AFFX-DapX-5_at 10.32065982
AFFX-DapX-M_at 11.44667872
AFFX-HSAC07/X00351_3_at 12.6013383
AFFX-HSAC07/X00351_5_at 10.58978839
AFFX-HSAC07/X00351_M_at 11.52311287
AFFX-hum_alu_at 14.40808915
AFFX-HUMGAPDH/M33197_3_at 12.22646543
AFFX-HUMGAPDH/M33197_5_at 11.58466672
AFFX-HUMGAPDH/M33197_M_at 11.78464465
AFFX-HUMISGF3A/M97935_3_at 9.454115391

Total number of rows: 11914

Table truncated, full table size 359 Kbytes.

Supplementary file Size Download File type/resource
GSM714156.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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