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Sample GSM714154 Query DataSets for GSM714154
Status Public on Jun 01, 2011
Title BT17
Sample type RNA
Source name Large airway epithelial cells
Organism Homo sapiens
Characteristics cell type: large airway epithelial cells
disease state: Lung Cancer
gender: NA
age: 70
packyears: 24
smoking status: Former
years passed since quitting: 30
cancer stage: IV
histology: Large cell carcinoma
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Data processing RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
Submission date Apr 25, 2011
Last update date Jun 01, 2011
Contact name Avrum Spira
Phone 617-638-4860
Fax 617-536-8093
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platform ID GPL13447
Series (2)
GSE28835 Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule
GSE29007 Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer

Data table header descriptions
VALUE log2 RMA signal

Data table
AFFX-BioB-3_at 7.751908344
AFFX-BioB-5_at 7.983794984
AFFX-BioB-M_at 8.231500789
AFFX-BioC-3_at 9.659284932
AFFX-BioC-5_at 9.306046288
AFFX-BioDn-3_at 11.8955331
AFFX-BioDn-5_at 10.7319846
AFFX-CreX-3_at 13.55735309
AFFX-CreX-5_at 13.16216285
AFFX-DapX-3_at 10.32154562
AFFX-DapX-5_at 8.991369677
AFFX-DapX-M_at 10.30480889
AFFX-HSAC07/X00351_3_at 12.36922584
AFFX-HSAC07/X00351_5_at 10.54954811
AFFX-HSAC07/X00351_M_at 11.48625998
AFFX-hum_alu_at 14.38668986
AFFX-HUMGAPDH/M33197_3_at 12.59917807
AFFX-HUMGAPDH/M33197_5_at 12.15960601
AFFX-HUMGAPDH/M33197_M_at 12.41021077
AFFX-HUMISGF3A/M97935_3_at 9.334503858

Total number of rows: 11914

Table truncated, full table size 359 Kbytes.

Supplementary file Size Download File type/resource
GSM714154.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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