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Sample GSM714152 Query DataSets for GSM714152
Status Public on Jun 01, 2011
Title BT14
Sample type RNA
Source name Large airway epithelial cells
Organism Homo sapiens
Characteristics cell type: large airway epithelial cells
disease state: Lung Cancer
gender: M
age: 81
packyears: 48
smoking status: Former
years passed since quitting: 20
cancer stage: IIB
histology: Squamous cell carcinoma
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Data processing RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
Submission date Apr 25, 2011
Last update date Jun 01, 2011
Contact name Avrum Spira
Phone 617-638-4860
Fax 617-536-8093
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platform ID GPL13447
Series (2)
GSE28835 Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule
GSE29007 Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer

Data table header descriptions
VALUE log2 RMA signal

Data table
AFFX-BioB-3_at 8.224910517
AFFX-BioB-5_at 8.377922945
AFFX-BioB-M_at 8.533846839
AFFX-BioC-3_at 9.943353566
AFFX-BioC-5_at 9.583645948
AFFX-BioDn-3_at 11.89081747
AFFX-BioDn-5_at 10.74351651
AFFX-CreX-3_at 13.32567897
AFFX-CreX-5_at 12.96341114
AFFX-DapX-3_at 10.48571975
AFFX-DapX-5_at 9.150989719
AFFX-DapX-M_at 10.48535372
AFFX-HSAC07/X00351_3_at 12.49136653
AFFX-HSAC07/X00351_5_at 10.2679482
AFFX-HSAC07/X00351_M_at 11.37202241
AFFX-hum_alu_at 14.38862954
AFFX-HUMGAPDH/M33197_3_at 11.83444097
AFFX-HUMGAPDH/M33197_5_at 11.33428052
AFFX-HUMGAPDH/M33197_M_at 11.64992607
AFFX-HUMISGF3A/M97935_3_at 9.46127511

Total number of rows: 11914

Table truncated, full table size 359 Kbytes.

Supplementary file Size Download File type/resource
GSM714152.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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