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Sample GSM714150 Query DataSets for GSM714150
Status Public on Jun 01, 2011
Title BT3
Sample type RNA
Source name Large airway epithelial cells
Organism Homo sapiens
Characteristics cell type: large airway epithelial cells
disease state: No Lung Cancer
gender: M
age: 53
packyears: 50
smoking status: Former
years passed since quitting: less than 1
cancer stage: NO CANCER
histology: Organizing pneumonitis
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggested Protocol
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Data processing RMA (Robust Multichip Average) generated expression value using Ensembl v58 CDF file
Submission date Apr 25, 2011
Last update date Jun 01, 2011
Contact name Avrum Spira
Phone 617-638-4860
Fax 617-536-8093
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
Platform ID GPL13447
Series (2)
GSE28835 Large airway epithelial cells from cigarette smokers with and without lung cancer undergoing flexible bronchoscopy in the operating room for resection of a suspicious lung nodule
GSE29007 Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer

Data table header descriptions
VALUE log2 RMA signal

Data table
AFFX-BioB-3_at 8.57967224
AFFX-BioB-5_at 8.800825399
AFFX-BioB-M_at 8.946184738
AFFX-BioC-3_at 10.25776574
AFFX-BioC-5_at 10.00503488
AFFX-BioDn-3_at 12.11755825
AFFX-BioDn-5_at 10.96991454
AFFX-CreX-3_at 13.48518524
AFFX-CreX-5_at 13.14023739
AFFX-DapX-3_at 11.17477125
AFFX-DapX-5_at 9.86609006
AFFX-DapX-M_at 11.07903532
AFFX-HSAC07/X00351_3_at 12.70126299
AFFX-HSAC07/X00351_5_at 9.542942719
AFFX-HSAC07/X00351_M_at 11.01728884
AFFX-hum_alu_at 14.40958096
AFFX-HUMGAPDH/M33197_3_at 12.10613827
AFFX-HUMGAPDH/M33197_5_at 10.66330275
AFFX-HUMGAPDH/M33197_M_at 11.39822409
AFFX-HUMISGF3A/M97935_3_at 9.990106385

Total number of rows: 11914

Table truncated, full table size 359 Kbytes.

Supplementary file Size Download File type/resource
GSM714150.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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