|
| Status |
Public on Jun 03, 2024 |
| Title |
cKO_Lats2-1_12w |
| Sample type |
SRA |
| |
|
| Source name |
mouse long bone
|
| Organism |
Mus musculus |
| Characteristics |
genotype: Lats2iECKO
age: post natal week 12
treatment: conditional Lats2 KO
tissue: bone
|
| Extracted molecule |
total RNA |
| Extraction protocol |
10x genomics Chromium V3
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic single cell |
| Library selection |
cDNA |
| Instrument model |
Illumina NextSeq 500 |
| |
|
| Data processing |
Read pre-processing using cutadapt version 3.5
Read alignment and feature counting using STARsolo version 2.7.10a
Assembly: mm39
Supplementary files format and content: Feature count matrices were generated using STARsolo and are present in mtx format with annotations present in tsv format
|
| |
|
| Submission date |
Feb 16, 2023 |
| Last update date |
Jun 03, 2024 |
| Contact name |
Paul-Georg Majev |
| E-mail(s) |
paul-georg.majev@mpi-muenster.mpg.de
|
| Organization name |
Max Planck Institute for Molecular Biomedicine
|
| Department |
Tissue Morphogenesis
|
| Street address |
Röntgenstraße 20
|
| City |
Münster |
| ZIP/Postal code |
48149 |
| Country |
Germany |
| |
|
| Platform ID |
GPL19057 |
| Series (1) |
| GSE225429 |
Endothelial LATS2 is a suppressor of bone marrow fibrosis |
|
| Relations |
| BioSample |
SAMN33325359 |
| SRA |
SRX19391223 |
