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Sample GSM691562 Query DataSets for GSM691562
Status Public on Mar 17, 2011
Title Patient with OAT 22
Sample type genomic
 
Channel 1
Source name Patient with OAT 22
Organism Homo sapiens
Characteristics source: peripheral blood
disease state: idiopathic severe oligozoospermia
Extracted molecule genomic DNA
Extraction protocol genomic DNA extracted from peripheral blood by standard methods
Label Cy5
Label protocol according to standard protocol Agilent Oligonucleotide Array-Based CGH for Genomic DNA Analysis (Version 4.0; June 2006)
 
Channel 2
Source name Promega Human Genomic DNA
Organism Homo sapiens
Characteristics source: peripheral blood
disease state: none
Extracted molecule genomic DNA
Extraction protocol genomic DNA extracted from peripheral blood by standard methods
Label Cy3
Label protocol according to standard protocol Agilent Oligonucleotide Array-Based CGH for Genomic DNA Analysis (Version 4.0; June 2006)
 
 
Hybridization protocol according to standard protocol Agilent Oligonucleotide Array-Based CGH for Genomic DNA Analysis (Version 4.0; June 2006)
Scan protocol Scanned on an Agilent G2565CA scanner
Data processing Agilent Feature Extraction Software (v 10.7)
 
Submission date Mar 15, 2011
Last update date Mar 17, 2011
Contact name Frank Tüttelmann
E-mail(s) frank.tuettelmann@ukmuenster.de
Organization name Institute of Human Genetics
Department University of Münster
Street address Vesaliusweg 12-14
City Münster
ZIP/Postal code 48149
Country Germany
 
Platform ID GPL9777
Series (1)
GSE27965 CNVs in spermatogenic failure

Data table header descriptions
ID_REF
VALUE normalized log10 ratio Cy5/Cy3

Data table
ID_REF VALUE
1 5.603252728e-003
2 0.000000000e+000
3 0.000000000e+000
4 -4.097590925e-002
5 4.796871395e-002
6 -4.115271757e-003
7 -2.356553045e-002
8 3.156739956e-002
9 -5.727555212e-002
10 4.108171177e-002
11 -7.916431050e-002
12 -2.110737590e-002
13 -2.895297904e-002
14 2.952263587e-003
15 1.352801534e-002
16 5.044992349e-002
17 -6.694064952e-002
18 2.949176240e-002
19 -9.768301321e-002
20 4.083487330e-002

Total number of rows: 420288

Table truncated, full table size 9956 Kbytes.




Supplementary file Size Download File type/resource
GSM691562_OAT_22_252185010988_1.txt.gz 43.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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