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Sample GSM683804 Query DataSets for GSM683804
Status Public on Mar 01, 2011
Title Myers_NT2-D1_2_None_UW
Sample type SRA
Source name NT2-D1
Organism Homo sapiens
Characteristics cell: NT2-D1
cell organism: Human
cell description: malignant pluripotent embryonal carcinoma (Ntera2)
cell karyotype: cancer
cell lineage: "The NTERA-2 cl.D1 cell line is a pluripotent human testicular embryonal carcinoma cell line derived by cloning the NTERA-2 cell line." - ATCC
cell sex: M
replicate: 2
treatment: None
obtainedby: UW
Biomaterial provider ATCC
Growth protocol Cells were grown according to ENCODE cell culture protocols:
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy Bisulfite-Seq
Library source genomic
Library selection Reduced Representation
Instrument model Illumina Genome Analyzer IIx
Description Reduced Representation
Data processing For data processing details see:
Submission date Mar 01, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL10999
Series (1)
GSE27584 DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha
SRA SRX066304
BioSample SAMN00621785

Supplementary file Size Download File type/resource
GSM683804_hg19_wgEncodeHaibMethylRrbsNt2d1UwSitesRep2.bedRrbs.gz 15.9 Mb (ftp)(http) BEDRRBS
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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