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Sample GSM665809 Query DataSets for GSM665809
Status Public on Feb 02, 2011
Title Chromatin accessibility assay of Fetal Heart Tissue; DS15643
Sample type SRA
Source name Fetal Heart primary tissue, day 117; DS15643
Organism Homo sapiens
Characteristics sample alias: fHeart.H-23435d117
sample common name: Fetal Heart
molecule: genomic DNA
disease: None
biomaterial_provider: University of Washington, Congenital Defects Lab. Ian Glass
biomaterial_type: Primary Tissue
tissue_type: Fetal Heart
tissue_depot: UW
collection_method: fetal
donor_id: H-23435
donor_age: day 117
donor_health_status: NA
donor_sex: Female
donor_ethnicity: NA
experiment_type: Chromatin Accessibility
extraction_protocol: Qiagen minElut
dnase_protocol: Stamlab DNase Protocol, Sabo, P. J. et al. Nat Methods 3, 511-518 (2006)
Extracted molecule genomic DNA
Extraction protocol Library construction protocol: Single read - Illumina
Library strategy DNase-Hypersensitivity
Library source genomic
Library selection DNAse
Instrument model Illumina Genome Analyzer IIx
Description sample_term_id: UBERON_0000948
assay_term_id: OBI_0001853
nucleic_acid_term_id: SO_0000352
Design description: Chromatin accessibility determination via DNase-seq
Library name: DS15643
EDACC Genboree Experiment Page:
EDACC Genboree Sample Page:
For data usage terms and conditions, please refer to:
Data processing Various levels of processed data files will be made available as this project proceeds.
Submission date Feb 02, 2011
Last update date May 15, 2019
Contact name Northwest REMC
Organization name University of Washington
Street address -
City Seattle
State/province WA
ZIP/Postal code 98195
Country USA
Platform ID GPL10999
Series (2)
GSE18927 University of Washington Human Reference Epigenome Mapping Project
GSE51336 Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution
SRA SRX040385
BioSample SAMN00204024

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA

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