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Sample GSM661409 Query DataSets for GSM661409
Status Public on Jan 30, 2012
Title 5_LS_whole_Double
Sample type RNA
 
Source name 5, LS, whole, Double
Organism Homo sapiens
Characteristics tissue: lesional psoriatic skin
patient: 5
condition: Lesional
region: whole
amplification: Double
material: sliced section
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy Kit
Label biotin
Label protocol Affymetrix single and double amplification protocol
 
Hybridization protocol Affymetrix protocol
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Jan 25, 2011
Last update date Jan 30, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) mayte.suarezfarinas@mssm.edu
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE26866 Combined Use of Laser Capture Microdissection and Microarray Analysis Identifies Locally Expressed Disease-Related Genes in Focal Regions of Psoriasis Vulgaris Skin Lesions

Data table header descriptions
ID_REF
VALUE GC-RMA normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 10.38463
1053_at 6.620844
117_at 5.844697
121_at 8.450723
1255_g_at 3.87294
1294_at 7.063738
1316_at 5.172892
1320_at 5.523404
1405_i_at 4.749159
1431_at 5.188661
1438_at 5.230583
1487_at 7.131121
1494_f_at 5.699519
1598_g_at 10.10233
160020_at 7.265193
1729_at 9.09705
177_at 6.214111
1773_at 4.422891
179_at 7.573079
1861_at 6.147893

Total number of rows: 22277

Table truncated, full table size 431 Kbytes.




Supplementary file Size Download File type/resource
GSM661409_2_HGU133A_2.0_Hiroshi_090308.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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