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Sample GSM661405 Query DataSets for GSM661405
Status Public on Jan 30, 2012
Title 3_LS_whole_Double
Sample type RNA
Source name 3, LS, whole, Double
Organism Homo sapiens
Characteristics tissue: lesional psoriatic skin
patient: 3
condition: Lesional
region: whole
amplification: Double
material: block
Extracted molecule total RNA
Extraction protocol QIAGEN Rneasy Kit
Label biotin
Label protocol Affymetrix single and double amplification protocol
Hybridization protocol Affymetrix protocol
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Data processing GCRMA (using gcrma package from R/Bioconductor)
Submission date Jan 25, 2011
Last update date Jan 30, 2012
Contact name Mayte Suarez-Farinas
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
Platform ID GPL571
Series (1)
GSE26866 Combined Use of Laser Capture Microdissection and Microarray Analysis Identifies Locally Expressed Disease-Related Genes in Focal Regions of Psoriasis Vulgaris Skin Lesions

Data table header descriptions
VALUE GC-RMA normalized Expression values in log-2 scale

Data table
1007_s_at 10.29771
1053_at 6.985633
117_at 6.025973
121_at 8.27974
1255_g_at 4.007019
1294_at 7.64862
1316_at 5.531801
1320_at 5.142655
1405_i_at 5.919952
1431_at 6.277118
1438_at 6.527976
1487_at 7.497944
1494_f_at 5.422189
1598_g_at 9.930141
160020_at 7.491343
1729_at 9.15796
177_at 6.696979
1773_at 4.981093
179_at 7.805849
1861_at 5.881413

Total number of rows: 22277

Table truncated, full table size 431 Kbytes.

Supplementary file Size Download File type/resource
GSM661405_14_HGU133A_2.0_Hiroshi_072508.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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