|
Status |
Public on Aug 14, 2022 |
Title |
C22 MI |
Sample type |
SRA |
|
|
Source name |
Muscle
|
Organism |
Capra hircus |
Characteristics |
tissue: Muscle group: MI treatment: 30 minutes of transportation
|
Extracted molecule |
total RNA |
Extraction protocol |
Blood RNA was extracted using a MagMAX™ Stabilized Blood Tubes RNA Isolation Kit by applied biosystems (Thermo Fisher Scientific, Waltham, MA) according to manufacturer’s instructions. Muscle RNA was extracted by using RNeasy® Fibrous Tissue Mini Kit (Qiagen, Germantown, MD) according to manufacturer’s procedures NEBNext® UltraTM RNA Library Prep kit from Illumina® (NEB, USA) were used to generate the sequencing libraries
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
Illumina HiSeq 4000 |
|
|
Description |
Muscle samples collected after 30 minutes of transportation
|
Data processing |
Data processing was done by Novagene Methods uploaded
|
|
|
Submission date |
Aug 09, 2022 |
Last update date |
Aug 14, 2022 |
Contact name |
phaneendra batchu |
E-mail(s) |
phaneendra.batchu@fvsu.edu
|
Organization name |
fort valley state university
|
Department |
Animal Science
|
Lab |
Meat Science
|
Street address |
1005 State univerity drive
|
City |
fort valley |
State/province |
georgia |
ZIP/Postal code |
31030 |
Country |
USA |
|
|
Platform ID |
GPL22146 |
Series (1) |
GSE210823 |
RNA-Seq Exploration of the Influence of Stress on Meat Quality in Spanish Goats |
|
Relations |
BioSample |
SAMN30218899 |
SRA |
SRX17005597 |