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Sample GSM6438831 Query DataSets for GSM6438831
Status Public on Aug 14, 2022
Title C22 MI
Sample type SRA
 
Source name Muscle
Organism Capra hircus
Characteristics tissue: Muscle
group: MI
treatment: 30 minutes of transportation
Extracted molecule total RNA
Extraction protocol Blood RNA was extracted using a MagMAX™ Stabilized Blood Tubes RNA Isolation Kit by applied biosystems (Thermo Fisher Scientific, Waltham, MA) according to manufacturer’s instructions. Muscle RNA was extracted by using RNeasy® Fibrous Tissue Mini Kit (Qiagen, Germantown, MD) according to manufacturer’s procedures
NEBNext® UltraTM RNA Library Prep kit from Illumina® (NEB, USA) were used to generate the sequencing libraries
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model Illumina HiSeq 4000
 
Description Muscle samples collected after 30 minutes of transportation
Data processing Data processing was done by Novagene
Methods uploaded
 
Submission date Aug 09, 2022
Last update date Aug 14, 2022
Contact name phaneendra batchu
E-mail(s) phaneendra.batchu@fvsu.edu
Organization name fort valley state university
Department Animal Science
Lab Meat Science
Street address 1005 State univerity drive
City fort valley
State/province georgia
ZIP/Postal code 31030
Country USA
 
Platform ID GPL22146
Series (1)
GSE210823 RNA-Seq Exploration of the Influence of Stress on Meat Quality in Spanish Goats
Relations
BioSample SAMN30218899
SRA SRX17005597

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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