GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM639884 Query DataSets for GSM639884
Status Public on Dec 15, 2010
Title Suprabasal epidermal cells, Sample 2
Sample type RNA
Source name Human epidermis from brest reduction
Organism Homo sapiens
Characteristics cell type: Suprabasal epidermal cells
donor: 2
Extracted molecule total RNA
Extraction protocol Standard Affymetrix protocol
Label Biotin
Label protocol Standard Affymetrix protocol
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS 5.0
Submission date Dec 14, 2010
Last update date Dec 15, 2010
Contact name Miroslav Blumenberg
Phone 212 263-5924
Organization name NYU School of Medicine
Department Dermatology
Lab Blumenberg
Street address 455 First Ave #874
City New York
State/province NY
ZIP/Postal code 10016
Country USA
Platform ID GPL571
Series (1)
GSE26059 Epidermal differentiation: basal vs. suprabasal keratinocytes

Data table header descriptions
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)

Data table
AFFX-BioB-5_at 406.536 P 0.000445901
AFFX-BioB-M_at 706.323 P 4.42873e-05
AFFX-BioB-3_at 329.605 P 4.42873e-05
AFFX-BioC-5_at 844.237 P 6.02111e-05
AFFX-BioC-3_at 833.182 P 4.42873e-05
AFFX-BioDn-5_at 1003.29 P 4.42873e-05
AFFX-BioDn-3_at 4610.92 P 5.16732e-05
AFFX-CreX-5_at 8214.13 P 5.16732e-05
AFFX-CreX-3_at 8589.97 P 4.42873e-05
AFFX-DapX-5_at 13.9191 A 0.156732
AFFX-DapX-M_at 12.2037 A 0.354453
AFFX-DapX-3_at 8.08381 A 0.425962
AFFX-LysX-5_at 8.96487 A 0.559354
AFFX-LysX-M_at 7.93933 A 0.559354
AFFX-LysX-3_at 2.7335 A 0.382599
AFFX-PheX-5_at 0.805063 A 0.699394
AFFX-PheX-M_at 0.43216 A 0.990663
AFFX-PheX-3_at 3.57365 A 0.804734
AFFX-ThrX-5_at 1.99357 A 0.645547
AFFX-ThrX-M_at 5.39141 A 0.60308

Total number of rows: 22277

Table truncated, full table size 671 Kbytes.

Supplementary file Size Download File type/resource
GSM639884_Alix_B4-_B1-_2_U133A_2.0.CEL.gz 2.0 Mb (ftp)(http) CEL
GSM639884_Alix_B4-_B1-_2_U133A_2.0.CHP.gz 441.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap