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Sample GSM639882 Query DataSets for GSM639882
Status Public on Dec 15, 2010
Title Total epidermal cells, all layers Sample 2
Sample type RNA
 
Source name Human epidermis from brest reduction
Organism Homo sapiens
Characteristics cell type: Total epidermal cells
donor: 2
Extracted molecule total RNA
Extraction protocol Standard Affymetrix protocol
Label Biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS 5.0
 
Submission date Dec 14, 2010
Last update date Dec 15, 2010
Contact name Miroslav Blumenberg
E-mail(s) miroslav.blumenberg@nyumc.org
Phone 212 263-5924
Organization name NYU School of Medicine
Department Dermatology
Lab Blumenberg
Street address 455 First Ave #874
City New York
State/province NY
ZIP/Postal code 10016
Country USA
 
Platform ID GPL571
Series (1)
GSE26059 Epidermal differentiation: basal vs. suprabasal keratinocytes

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 147.989 P 0.0012475
AFFX-BioB-M_at 193.649 P 5.16732e-05
AFFX-BioB-3_at 95.6005 P 0.000445901
AFFX-BioC-5_at 296.555 P 5.16732e-05
AFFX-BioC-3_at 318.364 P 7.00668e-05
AFFX-BioDn-5_at 353.691 P 4.42873e-05
AFFX-BioDn-3_at 1891.67 P 8.14279e-05
AFFX-CreX-5_at 4553.53 P 5.16732e-05
AFFX-CreX-3_at 4847.67 P 4.42873e-05
AFFX-DapX-5_at 1.36038 A 0.514891
AFFX-DapX-M_at 18.2606 A 0.131361
AFFX-DapX-3_at 1.5425 A 0.910522
AFFX-LysX-5_at 4.81531 A 0.672921
AFFX-LysX-M_at 8.68841 A 0.60308
AFFX-LysX-3_at 8.4447 A 0.147939
AFFX-PheX-5_at 3.31332 A 0.749204
AFFX-PheX-M_at 1.44903 A 0.876428
AFFX-PheX-3_at 11.9545 A 0.250777
AFFX-ThrX-5_at 1.89687 A 0.916426
AFFX-ThrX-M_at 0.940006 A 0.760937

Total number of rows: 22277

Table truncated, full table size 664 Kbytes.




Supplementary file Size Download File type/resource
GSM639882_Alix_B+_2_U133A_2.0.CEL.gz 1.9 Mb (ftp)(http) CEL
GSM639882_Alix_B+_2_U133A_2.0.CHP.gz 443.1 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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